Source code for cell_analysis_tools.metrics.hausdorff_distance

from scipy.spatial.distance import directed_hausdorff

from .helper import _validate_array_and_make_bool


[docs]def hausdorff_distance(mask_pred, mask_gt): """ Calculates the Hausdorff distance for a given image, provided a ground truth. Both arrays must have the same number of columns. see https://docs.scipy.org/doc/scipy/reference/generated/scipy.spatial.distance.directed_hausdorff.html Parameters ---------- mask_pred : np.ndarray predicted segmentation mask mask_gt : np.ndarray ground truth mask Returns ------- ddouble The directed Hausdorff distance between arrays u and v, index_1int index of point contributing to Hausdorff pair in u index_2int index of point contributing to Hausdorff pair in v """ mask_pred = _validate_array_and_make_bool(mask_pred) mask_gt = _validate_array_and_make_bool(mask_gt) return directed_hausdorff(mask_pred, mask_gt)